FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37781127
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA248200.06.43024394-95
AGATCGG282600.05.941651394-95
ATCGGAA244950.05.933813694-95
GCGTCGT119350.05.92998894-95
AGCGTCG135150.05.74634494-95
CGTCGTG123500.05.7307294-95
TAGATCG87800.05.43713192-93
TCGTGTA103950.05.20929192-93
GTCGTGT123550.05.017156694-95
Produced by FastQC (version 0.11.5)