FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26690620
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT104900.06.294057494-95
GATCGGA207750.06.230413494-95
AGCGTCG114800.06.08228694-95
CGTCGTG104400.05.91472194-95
ATCGGAA203500.05.753656494-95
AGATCGG233000.05.748897694-95
ATACGCG14157.2759576E-125.70668594-95
TCGTGTA87400.05.5434594-95
GTCGTGT99000.05.51764894-95
TAGATCG74350.05.430440492-93
TCGGAAG226850.05.42315994-95
CGTGTAG99550.05.41559394-95
AGAGCGT156800.05.271019594-95
GAGCGTC146900.05.157393594-95
Produced by FastQC (version 0.11.5)