FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34252066
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA250200.06.444698394-95
ATCGGAA248300.06.19752794-95
AGATCGG284650.06.048489694-95
TAGATCG88750.05.699429594-95
TCGGAAG276400.05.515909794-95
Produced by FastQC (version 0.11.5)