FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2343087
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA15750.05.73116394-95
AGAGCGT13251.2551027E-95.378300794-95
GATCGGA16301.2732926E-115.246318392-93
TCGTGTA7701.8780063E-45.24442694-95
AGATCGG18800.05.18042992-93
Produced by FastQC (version 0.11.5)