FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2575962
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG12550.06.624866594-95
ATCGGAA22100.06.019335794-95
GCGTCGT11501.2696546E-95.78379794-95
TCGGAAG23150.05.746320294-95
AGATCGG24000.05.64178392-93
TCGTGTA10451.8895298E-75.455665692-93
GATCGGA22150.05.362274692-93
AGAGCGT15957.2759576E-125.361602392-93
Produced by FastQC (version 0.11.5)