FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3063229
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCACTA3509.256941E-47.464349390-91
ATCGGAA32050.05.706023792-93
CACATCG9551.0786462E-65.471787594-95
CGGAAGA35250.05.45802894-95
AAGATCG13401.6825652E-95.317209290-91
GATCGGA32600.05.245443388-89
TCGGAAG33600.05.16001490-91
AGATCGG35050.05.1498390-91
ACGTCTG16652.5465852E-115.13522192-93
CAGATCG15504.947651E-105.0569994-95
Produced by FastQC (version 0.11.5)