FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2539845
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG10253.3032848E-96.025573794-95
AGCGTCG11353.324749E-85.44154492-93
TAGATCG6250.00216417745.319788584-85
AAGAGCG16753.092282E-115.105430692-93
AGAGCGT15605.8935257E-105.02502694-95
Produced by FastQC (version 0.11.5)