FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15604120
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG82450.06.13656794-95
GCGTCGT73450.05.91828594-95
GATCGGA142700.05.576444694-95
TAGATCG48150.05.525330594-95
GTCGTGT71750.05.4625994-95
CGTCGTG72300.05.4538994-95
TCGTGTA63550.05.27035894-95
ATCGGAA137950.05.2174494-95
AGATCGG157550.05.156371694-95
AGAGCGT107350.05.067222694-95
Produced by FastQC (version 0.11.5)