FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20210250
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA155700.05.827925794-95
AGATCGG174850.05.773811394-95
GTCGTGT80750.05.41270894-95
AGCGTCG91600.05.39395394-95
ATCGGAA156200.05.3834694-95
TAGATCG54550.05.356111592-93
GCGTCGT83750.05.24718394-95
TCGTGTA72450.05.180336594-95
CGTCGTG83050.05.148398494-95
Produced by FastQC (version 0.11.5)