FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12521057
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTCGT15600.05.93734892-93
ACGTTCG16450.05.919301592-93
TAGATCG47050.05.704245694-95
AGATCGG151300.05.431459494-95
GATCGGA138700.05.411155794-95
ATCGGAA135850.05.367327794-95
CGTCTGA67600.05.094489694-95
ACGTCTG74300.05.0826294-95
Produced by FastQC (version 0.11.5)