FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12521057
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA137900.05.477503394-95
CGTGTAG63500.05.423929794-95
ATCGGAA135750.05.35428494-95
TCGTGTA61300.05.347347394-95
AGCGTCG79950.05.318073394-95
GCGTCGT72900.05.311043394-95
AGATCGG152850.05.299180594-95
AGAGCGT102500.05.214088494-95
GTCGTGT66750.05.08867394-95
AAGAGCG117850.05.05899194-95
Produced by FastQC (version 0.11.5)