FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764785

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764785
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15194836
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA155550.06.00077994-95
GATCGGA157800.05.67439494-95
TCGGAAG164500.05.284456394-95
AGATCGG172600.05.28366892-93
TAGATCG50950.05.03459794-95
Produced by FastQC (version 0.11.5)