FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15742361
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA163650.05.864101494-95
GATCGGA167800.05.846476694-95
TCGTGTA73900.05.59294192-93
AGATCGG184850.05.371467694-95
GCGTCGT87650.05.311782494-95
CGTCGTG88600.05.28163894-95
CGTGTAG77550.05.20718894-95
GTCGTGT82350.05.04789894-95
TCGGAAG172700.05.020380594-95
Produced by FastQC (version 0.11.5)