FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7666290
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT46650.06.41599294-95
AGCGTCG50900.06.25362794-95
ATCGGAA87600.05.830143594-95
AGATCGG98150.05.7601294-95
TCGGAAG91150.05.603078494-95
TCGTGTA37800.05.59297894-95
AGAGCGT64700.05.50721394-95
TAGATCG30850.05.46698794-95
GATCGGA90300.05.445335492-93
GAGCGTC60250.05.36199994-95
CGTGTAG39000.05.17725194-95
GTCGTGT41750.05.177057790-91
CGTCGTG44050.05.12297994-95
Produced by FastQC (version 0.11.5)