FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8183217
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA130250.05.798937394-95
AGATCGG142250.05.74387894-95
ACACGTC66000.05.68606994-95
CACGTCT63550.05.681029394-95
CGTCTGA54100.05.663585794-95
ACGTCTG59700.05.609753694-95
TCGGAAG127850.05.53623594-95
CGGAAGA132300.05.385926294-95
ATCGGAA126900.05.371251692-93
AAGATCG48250.05.218041494-95
GAGATCG51950.05.21216794-95
TAGATCG43550.05.126192692-93
CACGCAT21450.05.093654694-95
CACACGT77650.05.04658692-93
Produced by FastQC (version 0.11.5)