FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8183217
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG72000.06.928649494-95
TCGTGTA53700.06.59134194-95
GAGCGTC85750.06.399405594-95
TAGATCG44350.06.320481394-95
GTCGTGT59450.06.1536294-95
GCGTCGT64400.06.08639194-95
AGAGCGT90850.05.883278494-95
CGTGTAG54600.05.830072494-95
CGTCGTG62650.05.801373592-93
GATCGGA131950.05.779062794-95
AAGAGCG102150.05.76733494-95
AGATCGG145050.05.68294694-95
ATCGGAA127650.05.45264692-93
TCGGAAG132450.05.272992694-95
CGGAAGA134700.05.16727894-95
Produced by FastQC (version 0.11.5)