EGAF00005764796 FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	EGAF00005764796
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12979479
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	11490	0.0	6.429598	94-95
TCGTGTA	8495	0.0	6.1518073	94-95
GAGCGTC	13530	0.0	6.0571	94-95
GCGTCGT	10405	0.0	5.912908	94-95
ATCGGAA	20305	0.0	5.8844843	94-95
GATCGGA	21155	0.0	5.872623	94-95
GTCGTGT	9440	0.0	5.863101	94-95
AGATCGG	23020	0.0	5.778647	94-95
TAGATCG	6870	0.0	5.774351	94-95
TCGGAAG	20740	0.0	5.772517	94-95
CGTCGTG	10150	0.0	5.6870055	94-95
CGTGTAG	8685	0.0	5.552258	94-95
CGTAGTG	2580	0.0	5.524271	94-95
AAGAGCG	16080	0.0	5.451095	94-95
AGAGCGT	14460	0.0	5.3882656	94-95
CGGAAGA	20920	0.0	5.2005258	94-95