FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9958150
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA134000.05.99123594-95
GATCGGA136500.05.60309194-95
TCGGAAG138850.05.47404794-95
CGTATGC10105.519323E-75.408924694-95
TAGATCG48050.05.38812494-95
AGATCGG151250.05.323039592-93
CACGTCT87900.05.134157794-95
ACACGTC73800.05.11735194-95
CGGAAGA140150.05.10126594-95
Produced by FastQC (version 0.11.5)