FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9958150
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA133950.06.02958194-95
GTCGTGT64750.05.906592494-95
TAGATCG46300.05.90021494-95
GCGTCGT69850.05.74739794-95
TCGGAAG137150.05.698374394-95
TCGTGTA59300.05.648268794-95
GATCGGA135750.05.617151394-95
GAGCGTC90600.05.61095194-95
CGTCGTG68050.05.58525294-95
AGCGTCG74850.05.49041594-95
AGATCGG149150.05.43098792-93
AGAGCGT97050.05.311474394-95
CGGAAGA142900.05.003629794-95
Produced by FastQC (version 0.11.5)