FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10747579
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA75550.06.57048994-95
ACACGTC94000.05.98833994-95
ACGTCTG83050.05.86273394-95
CACGTCT92550.05.851191594-95
GATCGGA184050.05.80714394-95
ATCGGAA177050.05.7416194-95
CACACGT111750.05.69604194-95
AGATCGG199750.05.564740794-95
TAGATCG61550.05.47956694-95
TCGGAAG180050.05.395305694-95
GCACACG124350.05.1952894-95
CGGAAGA183350.05.181612594-95
Produced by FastQC (version 0.11.5)