FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2404363
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGAT2100.0067528899.04730262-63
AGATCGG19950.05.834221494-95
CAGATCG9702.450306E-75.632300494-95
ATCGGAA16950.05.60557294-95
GATCGGA18500.05.135916794-95
GCGTCGT9809.93448E-65.0900692-93
GTCGTGT10304.5414563E-65.07358794-95
Produced by FastQC (version 0.11.5)