FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2758520
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACGCAA2150.0081866588.83743470-71
GATCGGA24500.05.428758694-95
ATCGGAA24700.05.38480194-95
AAGATCG10703.097557E-75.327286294-95
TAGATCG9101.4955531E-55.219723788-89
Produced by FastQC (version 0.11.5)