FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2851504
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGATCG12801.4551915E-115.938012694-95
TAGATCG9956.812843E-85.728585292-93
ACACGTC17700.05.636079394-95
AGATCGG32950.05.4784794-95
ATCGGAA28950.05.25088594-95
CACACGT20600.05.188554394-95
GATCGGA29850.05.17213894-95
CTACCGG6950.00146169225.12584792-93
Produced by FastQC (version 0.11.5)