FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2851504
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT15250.06.38651894-95
ATTGGTC9050.00197165346.29794073
CGTCGTG15700.06.20346594-95
GCGTCGT16000.06.0871592-93
TCGTGTA13053.6379788E-126.006943794-95
AGATCGG32800.05.50414594-95
GATCGGA29050.05.31517294-95
ATCGGAA29150.05.296938494-95
AGCGTCG17950.05.293533392-93
GAGATCG13702.9467628E-95.20176694-95
Produced by FastQC (version 0.11.5)