FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2485617
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATAGGC6950.00708017876.836932
CGTGTAG13400.06.204535594-95
GCGTCGT12151.3460522E-105.86460290-91
TCGTGTA10952.4247129E-95.857216492-93
GTCGTGT12201.4915713E-105.841213792-93
AAGAGCG19800.05.758668494-95
ATCGGAA23000.05.26666890-91
AGATCGG24000.05.14567188-89
AGCGTCG13451.0186341E-85.121171590-91
AAGATCG9352.3832636E-55.081177794-95
TAGATCG8451.3779991E-45.060080592-93
Produced by FastQC (version 0.11.5)