FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764817

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764817
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2444346
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGCCG2850.004010203311.6663113
GACGGGT3550.0087341416.69021160-61
AGATCGG17100.05.694854394-95
TGCGTGT6150.0017642095.40689394-95
GATCGGA15054.0017767E-115.365834794-95
ATCGGAA14651.03682396E-105.349721492-93
Produced by FastQC (version 0.11.5)