FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764826

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764826
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12747272
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG71250.06.3676594-95
GTCGTGT65950.06.159025794-95
AGCGTCG80350.05.912492392-93
TCGTGTA58700.05.705736694-95
GCGTCGT73400.05.469115392-93
TAGATCG45450.05.383066792-93
GATCGGA136300.05.210819294-95
ATCGGAA132500.05.163061694-95
CGTGTAG64050.05.154972694-95
AGATCGG151450.05.050301694-95
Produced by FastQC (version 0.11.5)