FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764828

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764828
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16378683
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT84100.05.95983694-95
CGTCGTG82600.05.665444494-95
ATCGGAA154400.05.600178794-95
GATCGGA153450.05.30976294-95
AGCGTCG92050.05.264464494-95
AGATCGG168550.05.144098892-93
TCGTGTA73100.05.134374694-95
GTCGTGT81900.05.017761794-95
Produced by FastQC (version 0.11.5)