FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15441269
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG84550.05.61900894-95
GATCGGA159200.05.55064194-95
GCGTCGT85050.05.334605794-95
AGATCGG174400.05.325660794-95
TCGTGTA71200.05.304660392-93
ATCGGAA156100.05.29565494-95
CGTGTAG75650.05.212455794-95
AGCGTCG92350.05.14438692-93
GTCGTGT79650.05.09980594-95
TCGGAAG165500.05.06663994-95
Produced by FastQC (version 0.11.5)