FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13362548
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA114400.05.481872694-95
AGATCGG127350.05.44671994-95
AGAGCGT89650.05.193460594-95
TCGTGTA54250.05.123151394-95
AGCGTCG66450.05.11201594-95
CGTGTAG59300.05.08744994-95
ATCGGAA114550.05.059944694-95
Produced by FastQC (version 0.11.5)