FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7802838
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA87900.06.216026394-95
GATCGGA90300.06.05081794-95
AGCGTCG51600.05.846930594-95
AGATCGG100000.05.701448494-95
TAGATCG33800.05.271258492-93
GCGTCGT46300.05.130892894-95
TCGTGTA40050.05.04185594-95
TCGGAAG91500.05.01083594-95
Produced by FastQC (version 0.11.5)