FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764841

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764841
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13185216
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA208150.06.161883494-95
ATCGGAA201100.05.952708294-95
ACACGTC106150.05.92955494-95
AGATCGG226300.05.867098394-95
TAGATCG67950.05.697630494-95
TCGGAAG204700.05.46511494-95
CGTCTGA89850.05.39272494-95
CACGTCT109150.05.157280494-95
ACGTCTG97400.05.145406294-95
CACACGT124350.05.06169894-95
Produced by FastQC (version 0.11.5)