FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764842

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764842
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13185216
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT96150.06.34928894-95
TCGTGTA84800.06.330730494-95
GATCGGA210650.06.10066294-95
GCGTCGT103600.06.09905192-93
CGTCGTG102100.06.002541594-95
ATCGGAA199200.05.9862694-95
AGATCGG229550.05.919158594-95
AGCGTCG115000.05.866265394-95
AGAGCGT145650.05.757121694-95
CGTGTAG85450.05.754392694-95
GAGCGTC135900.05.698221794-95
TCGGAAG202550.05.547152594-95
TAGATCG67750.05.539735394-95
AAGAGCG162800.05.413283394-95
CGTAGTG27750.05.307254394-95
AAGATCG78200.05.25509594-95
Produced by FastQC (version 0.11.5)