FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10119706
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT88450.06.229838494-95
GATCGGA140950.05.88094394-95
TAGATCG48650.05.809660494-95
AGATCGG154800.05.799725594-95
ATCGGAA133650.05.79342394-95
ACACGTC76050.05.68406194-95
ACGTCTG67500.05.27805794-95
TCGGAAG139700.05.27050194-95
Produced by FastQC (version 0.11.5)