FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764844

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764844
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10119706
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTGTA59100.06.87295194-95
GCGTCGT72600.06.47833294-95
GTCGTGT66350.06.08614994-95
CGTCGTG70400.05.97221294-95
AGCGTCG79100.05.945978694-95
CGTGTAG60500.05.850129694-95
AGATCGG156150.05.795856594-95
TAGATCG47200.05.787492894-95
GATCGGA142800.05.7055994-95
ATCGGAA137050.05.65032294-95
AGAGCGT100450.05.320680694-95
TCGGAAG141050.05.20379394-95
GAGCGTC93700.05.070186692-93
Produced by FastQC (version 0.11.5)