FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13381965
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA202800.06.4531994-95
ATCGGAA195050.06.2712294-95
TCGGAAG195600.06.01072994-95
CGTCTGA84100.05.789601394-95
AGATCGG220800.05.701217794-95
CGGAAGA196850.05.682982494-95
TAGATCG67550.05.62533192-93
ACGTCTG95950.05.619163594-95
CACGTCT103200.05.293451394-95
ACACGTC102050.05.14319292-93
Produced by FastQC (version 0.11.5)