FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764847

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764847
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10664305
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA162550.05.990734694-95
AGATCGG179050.05.969272694-95
ATCGGAA155800.05.82343494-95
TAGATCG54850.05.456034794-95
TCGGAAG159250.05.44373194-95
ACGTCTG73100.05.32855894-95
CGGAAGA162050.05.17379194-95
GCATTCG24400.05.159044794-95
CACGTCT83800.05.158347694-95
CGTCTGA66400.05.150460292-93
AAGATCG58600.05.10688694-95
ACACGTC79800.05.08951594-95
Produced by FastQC (version 0.11.5)