FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18028934
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGTGT63100.05.19416494-95
GCGTCGT64750.05.09848392-93
TCGTGTA56300.05.062194394-95
AGCGTCG69150.05.04883492-93
Produced by FastQC (version 0.11.5)