FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17822731
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA133100.05.317474494-95
TAGATCG47000.05.30589594-95
GCGTCGT70500.05.05323394-95
AGATCGG145750.05.018909594-95
Produced by FastQC (version 0.11.5)