FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19342882
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA112950.05.572209494-95
ATCGGAA112900.05.25912994-95
GCGTCGT62000.05.133113494-95
TAGATCG38950.05.000047792-93
Produced by FastQC (version 0.11.5)