FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31960854
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA222750.06.50398494-95
ATCGGAA220300.06.198986594-95
AGATCGG257050.05.857860694-95
TAGATCG77850.05.857468694-95
AGCGTCG122050.05.701606394-95
GCGTCGT107450.05.65849594-95
CGTCGTG111700.05.63456194-95
GTCGTGT104000.05.4579894-95
TCGTGTA92500.05.41761594-95
TCGGAAG248450.05.314998694-95
Produced by FastQC (version 0.11.5)