FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764871

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764871
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21049697
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA158500.06.128962594-95
GATCGGA161950.06.101060494-95
TAGATCG57650.06.015150594-95
AGATCGG183650.05.781087494-95
TCGGAAG176200.05.47284494-95
Produced by FastQC (version 0.11.5)