FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21049697
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA159950.06.087898794-95
GATCGGA162450.06.0234594-95
GCGTCGT78900.05.839726494-95
AGATCGG181550.05.82145594-95
CGTCGTG79250.05.783967594-95
AGCGTCG89000.05.657357794-95
TAGATCG58350.05.57631894-95
TCGGAAG180650.05.42975194-95
TCGTGTA66000.05.289823594-95
GAGCGTC113800.05.196666794-95
AGAGCGT120900.05.048642694-95
Produced by FastQC (version 0.11.5)