FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18147132
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA115000.06.13375194-95
AGATCGG132550.06.038341594-95
GCGTCGT56700.05.69669392-93
TCGTGTA48350.05.648965494-95
GTCGTGT57050.05.62012194-95
ATCGGAA115850.05.57622694-95
CGTCGTG58450.05.363607494-95
AGCGTCG62350.05.294755594-95
TAGATCG42200.05.29033294-95
AAGAGCG104500.05.1364194-95
TCGGAAG131950.05.02183494-95
Produced by FastQC (version 0.11.5)