FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27255912
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA177150.05.75155994-95
ATCGGAA177700.05.74712394-95
CGTCGTG93100.05.714361794-95
TAGATCG64950.05.667896794-95
GCGTCGT87000.05.569040394-95
GTCGTGT87550.05.479799394-95
AGCGTCG98700.05.43826994-95
AGATCGG203600.05.365985494-95
TCGTGTA76350.05.0393694-95
TCGGAAG203700.05.025226694-95
GAGCGTC132350.05.00667894-95
Produced by FastQC (version 0.11.5)