FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764878

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764878
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25731716
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT66400.05.794449394-95
GATCGGA130150.05.74819794-95
TAGATCG49450.05.52327694-95
AGCGTCG76450.05.40551494-95
ATCGGAA129800.05.397747594-95
AGATCGG147000.05.186243594-95
Produced by FastQC (version 0.11.5)