FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764890

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764890
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31807810
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGAAT8650.0085492466.0402958
TCGTGTA128250.05.57407794-95
AGATCGG255200.05.276746794-95
GATCGGA229500.05.081157794-95
CGTGTAG134750.05.058444594-95
CGTCGTG126150.05.02675792-93
TAGATCG83800.05.01641194-95
Produced by FastQC (version 0.11.5)