FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32330637
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA257000.05.89595394-95
AGCGTCG151600.05.577213394-95
TCGTGTA129000.05.4864794-95
GTCGTGT142900.05.4015494-95
AGATCGG285050.05.332432794-95
CGTCGTG135600.05.27197494-95
ATCGGAA254600.05.270556494-95
GCGTCGT134750.05.217102594-95
Produced by FastQC (version 0.11.5)