FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21520103
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT113000.05.947995794-95
CGTCGTG111050.05.795799794-95
TCGTGTA96500.05.759054794-95
GTCGTGT106700.05.74272494-95
GATCGGA212350.05.469142494-95
AGATCGG235300.05.40000994-95
AGCGTCG122850.05.355096394-95
ATCGGAA209400.05.342036794-95
TAGATCG74050.05.195801794-95
CGTGTAG98300.05.097903394-95
AGAGCGT160700.05.083996394-95
TCGGAAG225500.05.055421494-95
Produced by FastQC (version 0.11.5)