FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005764916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005764916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26708944
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA157150.06.030091394-95
ATCGGAA156800.05.89208394-95
GCGTCGT79850.05.79996194-95
AGATCGG177700.05.73370394-95
AGCGTCG87100.05.67166594-95
TAGATCG55000.05.570476594-95
CGTCGTG83050.05.54788594-95
Produced by FastQC (version 0.11.5)